Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 AC126177.1-201ENST00000547829 2218 ntBASIC12.46□□□□□ -0.41
CKS2P33552 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CKS2P33552 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.46□□□□□ -0.41
CKS2P33552 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 RPPH1-201ENST00000516869 333 ntBASIC12.46□□□□□ -0.41
CKS2P33552 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.46□□□□□ -0.41
CKS2P33552 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CKS2P33552 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS2P33552 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CKS2P33552 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.46□□□□□ -0.42
CKS2P33552 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CKS2P33552 KRT89P-201ENST00000620027 1478 ntBASIC12.46□□□□□ -0.42
CKS2P33552 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CKS2P33552 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CKS2P33552 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.45□□□□□ -0.42
CKS2P33552 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.45□□□□□ -0.42
CKS2P33552 FAM197Y4-202ENST00000622692 608 ntBASIC12.45□□□□□ -0.42
CKS2P33552 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CKS2P33552 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CKS2P33552 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.45□□□□□ -0.42
CKS2P33552 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.45□□□□□ -0.42
CKS2P33552 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.44□□□□□ -0.42
CKS2P33552 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.44□□□□□ -0.42
CKS2P33552 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CKS2P33552 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CKS2P33552 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms