Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 BX005266.1-201ENST00000473402 457 ntBASIC18.38■□□□□ 0.53
RFX1P22670 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.38■□□□□ 0.53
RFX1P22670 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.38■□□□□ 0.53
RFX1P22670 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 AL590787.1-201ENST00000568856 1315 ntBASIC18.38■□□□□ 0.53
RFX1P22670 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX1P22670 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX1P22670 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX1P22670 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX1P22670 FLJ38576-201ENST00000623820 2459 ntBASIC18.38■□□□□ 0.53
RFX1P22670 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX1P22670 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RFX1P22670 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 AP006288.1-201ENST00000446065 395 ntBASIC18.37■□□□□ 0.53
RFX1P22670 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX1P22670 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.37■□□□□ 0.53
RFX1P22670 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
RFX1P22670 AC092364.2-202ENST00000597012 1073 ntBASIC18.37■□□□□ 0.53
RFX1P22670 AC064836.3-201ENST00000607928 673 ntBASIC18.37■□□□□ 0.53
RFX1P22670 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX1P22670 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX1P22670 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX1P22670 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX1P22670 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 AC099398.1-201ENST00000567919 2776 ntBASIC18.36■□□□□ 0.53
RFX1P22670 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.36■□□□□ 0.53
RFX1P22670 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RFX1P22670 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.36■□□□□ 0.53
RFX1P22670 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX1P22670 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 CYMP-203ENST00000474680 1263 ntBASIC18.36■□□□□ 0.53
RFX1P22670 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.36■□□□□ 0.53
RFX1P22670 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.36■□□□□ 0.53
RFX1P22670 PCDHB17P-201ENST00000539533 2393 ntBASIC18.36■□□□□ 0.53
RFX1P22670 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX1P22670 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.36■□□□□ 0.53
RFX1P22670 AC005829.1-201ENST00000570002 483 ntBASIC18.36■□□□□ 0.53
RFX1P22670 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RFX1P22670 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.36■□□□□ 0.53
RFX1P22670 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX1P22670 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX1P22670 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX1P22670 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX1P22670 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFX1P22670 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX1P22670 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX1P22670 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RFX1P22670 LINC00895-201ENST00000629028 1637 ntBASIC18.35■□□□□ 0.53
RFX1P22670 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX1P22670 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms