Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 AC068418.2-201ENST00000577309 3703 ntBASIC17.13■□□□□ 0.33
USP1O94782 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP1O94782 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP1O94782 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.13■□□□□ 0.33
USP1O94782 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.13■□□□□ 0.33
USP1O94782 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.13■□□□□ 0.33
USP1O94782 FOSL1P1-201ENST00000511041 816 ntBASIC17.13■□□□□ 0.33
USP1O94782 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.13■□□□□ 0.33
USP1O94782 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 MIR3652-201ENST00000579335 131 ntBASIC17.13■□□□□ 0.33
USP1O94782 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP1O94782 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 HLA-A-202ENST00000376806 1854 ntBASIC17.13■□□□□ 0.33
USP1O94782 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.13■□□□□ 0.33
USP1O94782 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP1O94782 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.12■□□□□ 0.33
USP1O94782 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
USP1O94782 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.12■□□□□ 0.33
USP1O94782 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.12■□□□□ 0.33
USP1O94782 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.12■□□□□ 0.33
USP1O94782 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.12■□□□□ 0.33
USP1O94782 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.12■□□□□ 0.33
USP1O94782 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.12■□□□□ 0.33
USP1O94782 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
USP1O94782 AL513477.1-201ENST00000602865 2407 ntBASIC17.12■□□□□ 0.33
USP1O94782 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP1O94782 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP1O94782 NCF1C-201ENST00000438382 1427 ntBASIC17.12■□□□□ 0.33
USP1O94782 AL391256.1-201ENST00000443260 1855 ntBASIC17.12■□□□□ 0.33
USP1O94782 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
USP1O94782 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.11■□□□□ 0.33
USP1O94782 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
USP1O94782 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP1O94782 RBM17P3-201ENST00000417687 1192 ntBASIC17.11■□□□□ 0.33
USP1O94782 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.11■□□□□ 0.33
USP1O94782 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 BX005266.1-201ENST00000473402 457 ntBASIC17.11■□□□□ 0.33
USP1O94782 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.11■□□□□ 0.33
USP1O94782 AL139288.1-201ENST00000623748 933 ntBASIC17.11■□□□□ 0.33
USP1O94782 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
USP1O94782 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms