Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 AC104784.1-201ENST00000473096 294 ntBASIC7.4□□□□□ -1.22
USH2AO75445 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC7.4□□□□□ -1.22
USH2AO75445 APRT-204ENST00000563655 709 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 MIR3619-201ENST00000579667 83 ntBASIC7.4□□□□□ -1.22
USH2AO75445 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
USH2AO75445 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
USH2AO75445 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC7.4□□□□□ -1.22
USH2AO75445 MIR3907-201ENST00000579424 151 ntBASIC7.4□□□□□ -1.22
USH2AO75445 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
USH2AO75445 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC7.4□□□□□ -1.22
USH2AO75445 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USH2AO75445 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC7.4□□□□□ -1.23
USH2AO75445 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
USH2AO75445 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 TP73-213ENST00000604479 1623 ntTSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
USH2AO75445 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 FAM21FP-201ENST00000426241 1131 ntBASIC7.4□□□□□ -1.23
USH2AO75445 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC7.4□□□□□ -1.23
USH2AO75445 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC7.4□□□□□ -1.23
USH2AO75445 ATF5-205ENST00000600336 682 ntTSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 CU634019.7-201ENST00000624153 1185 ntBASIC7.4□□□□□ -1.23
USH2AO75445 FP236241.2-201ENST00000624906 1185 ntBASIC7.4□□□□□ -1.23
USH2AO75445 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC7.4□□□□□ -1.23
USH2AO75445 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USH2AO75445 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC7.4□□□□□ -1.23
USH2AO75445 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC7.39□□□□□ -1.23
USH2AO75445 TPO-206ENST00000382269 1155 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 RN7SL181P-201ENST00000462921 277 ntBASIC7.39□□□□□ -1.23
USH2AO75445 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC7.39□□□□□ -1.23
USH2AO75445 RERG-205ENST00000537647 935 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC7.39□□□□□ -1.23
USH2AO75445 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC7.39□□□□□ -1.23
USH2AO75445 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC7.39□□□□□ -1.23
USH2AO75445 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USH2AO75445 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms