Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHMP2AO43633 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP2AO43633 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 HMGA1P7-201ENST00000406908 502 ntBASIC18.95■□□□□ 0.62
CHMP2AO43633 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.95■□□□□ 0.62
CHMP2AO43633 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.95■□□□□ 0.62
CHMP2AO43633 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.95■□□□□ 0.62
CHMP2AO43633 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.95■□□□□ 0.62
CHMP2AO43633 AL031432.2-201ENST00000566714 459 ntBASIC18.95■□□□□ 0.62
CHMP2AO43633 AL928711.1-201ENST00000570165 459 ntBASIC18.95■□□□□ 0.62
CHMP2AO43633 AC091167.2-201ENST00000579581 588 ntBASIC18.95■□□□□ 0.62
CHMP2AO43633 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP2AO43633 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 AL645728.2-201ENST00000641974 660 ntBASIC18.95■□□□□ 0.62
CHMP2AO43633 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP2AO43633 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2AO43633 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHMP2AO43633 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2AO43633 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHMP2AO43633 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.94■□□□□ 0.62
CHMP2AO43633 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2AO43633 GPALPP1-207ENST00000611650 899 ntBASIC18.94■□□□□ 0.62
CHMP2AO43633 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.94■□□□□ 0.62
CHMP2AO43633 C20orf181-201ENST00000623918 480 ntBASIC18.94■□□□□ 0.62
CHMP2AO43633 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP2AO43633 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
CHMP2AO43633 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2AO43633 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHMP2AO43633 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2AO43633 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP2AO43633 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 LTB4R2-202ENST00000528054 3092 ntBASIC18.93■□□□□ 0.62
CHMP2AO43633 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2AO43633 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 HTR5BP-201ENST00000430851 1154 ntBASIC18.93■□□□□ 0.62
CHMP2AO43633 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP2AO43633 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2AO43633 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CHMP2AO43633 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP2AO43633 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
CHMP2AO43633 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2AO43633 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP2AO43633 AC005829.1-201ENST00000570002 483 ntBASIC18.93■□□□□ 0.62
CHMP2AO43633 MIR4469-201ENST00000583919 79 ntBASIC18.93■□□□□ 0.62
CHMP2AO43633 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
CHMP2AO43633 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHMP2AO43633 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.93■□□□□ 0.62
CHMP2AO43633 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMP2AO43633 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2AO43633 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CHMP2AO43633 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2AO43633 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHMP2AO43633 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2AO43633 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms