Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK1AO00322 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1AO00322 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
UPK1AO00322 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK1AO00322 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK1AO00322 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1AO00322 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1AO00322 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
UPK1AO00322 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK1AO00322 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK1AO00322 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 ALOX12P2-203ENST00000570921 1945 ntBASIC16■□□□□ 0.15
UPK1AO00322 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 AL645728.1-201ENST00000366221 2101 ntBASIC16■□□□□ 0.15
UPK1AO00322 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 HNRNPRP1-201ENST00000453465 1695 ntBASIC16■□□□□ 0.15
UPK1AO00322 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
UPK1AO00322 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16■□□□□ 0.15
UPK1AO00322 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16■□□□□ 0.15
UPK1AO00322 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
UPK1AO00322 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
UPK1AO00322 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK1AO00322 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
UPK1AO00322 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.99■□□□□ 0.15
UPK1AO00322 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.99■□□□□ 0.15
UPK1AO00322 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
UPK1AO00322 AC021087.4-201ENST00000563761 564 ntBASIC15.99■□□□□ 0.15
UPK1AO00322 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 AC025062.2-201ENST00000605477 670 ntBASIC15.99■□□□□ 0.15
UPK1AO00322 AL139424.1-201ENST00000607572 797 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms