Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PAWRP1-201ENST00000451083 565 ntBASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 KRT18P35-201ENST00000510488 1269 ntBASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AL139424.1-201ENST00000607572 797 ntBASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AL139288.1-201ENST00000623748 933 ntBASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 SNX33P1-201ENST00000592116 1762 ntBASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHA3Q9Y5H8 AL356309.3-201ENST00000624132 1934 ntBASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 AC005052.1-201ENST00000625181 2492 ntBASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
PCDHA3Q9Y5H8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHA3Q9Y5H8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AC008894.3-201ENST00000624324 3103 ntBASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 FOSL1P1-201ENST00000511041 816 ntBASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHA3Q9Y5H8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA3Q9Y5H8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms