Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 COX20P2-201ENST00000452636 358 ntBASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 AC109322.1-201ENST00000524499 1264 ntBASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 AC009093.7-201ENST00000623853 1223 ntBASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA9Q9Y5G4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AC092919.2-201ENST00000623631 1645 ntBASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AC026120.1-201ENST00000611536 926 ntBASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 AL645728.2-201ENST00000641974 660 ntBASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA9Q9Y5G4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 AL627223.1-201ENST00000416693 442 ntBASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 AC046185.3-201ENST00000623228 1824 ntBASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA9Q9Y5G4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms