Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 KRT19P2-202ENST00000557173 1012 ntBASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PDPK2P-202ENST00000562415 1191 ntBASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 AL355385.1-201ENST00000606123 409 ntBASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 AC007064.4-201ENST00000637740 555 ntBASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 AP001094.4-201ENST00000579008 2176 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 AC025580.3-201ENST00000617932 1424 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 AC254562.1-201ENST00000417586 456 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CNN2P11-201ENST00000429351 262 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 MKNK2P1-201ENST00000437526 628 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 METTL21AP1-201ENST00000438852 635 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 AC023141.13-201ENST00000604991 943 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 AL590787.1-201ENST00000568856 1315 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ELL2P1-201ENST00000413990 1906 ntBASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA1Q9UND3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 HMGN1P19-201ENST00000436976 333 ntBASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 AL135999.2-201ENST00000622438 1686 ntBASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPIPA1Q9UND3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms