Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC116407.3-201ENST00000623905 1129 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 AP000867.4-201ENST00000641616 219 ntBASIC15.01□□□□□ -0.01
VRK1Q99986 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VRK1Q99986 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK1Q99986 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VRK1Q99986 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
VRK1Q99986 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 AC100803.2-201ENST00000562459 1963 ntBASIC15□□□□□ -0.01
VRK1Q99986 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 COX5BP2-201ENST00000392354 334 ntBASIC15□□□□□ -0.01
VRK1Q99986 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15□□□□□ -0.01
VRK1Q99986 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 RPL13AP23-201ENST00000480739 586 ntBASIC15□□□□□ -0.01
VRK1Q99986 AC092910.1-201ENST00000482027 1129 ntBASIC15□□□□□ -0.01
VRK1Q99986 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 SLC25A1P1-201ENST00000528351 927 ntBASIC15□□□□□ -0.01
VRK1Q99986 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15□□□□□ -0.01
VRK1Q99986 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15□□□□□ -0.01
VRK1Q99986 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15□□□□□ -0.01
VRK1Q99986 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15□□□□□ -0.01
VRK1Q99986 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VRK1Q99986 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 FLJ38576-201ENST00000623820 2459 ntBASIC15□□□□□ -0.01
VRK1Q99986 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VRK1Q99986 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15□□□□□ -0.01
VRK1Q99986 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 ZNF259P1-201ENST00000407656 1365 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.99□□□□□ -0.01
VRK1Q99986 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
VRK1Q99986 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 PMS2P1-201ENST00000431037 1228 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 AC073592.5-201ENST00000624854 528 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VRK1Q99986 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.99□□□□□ -0.01
VRK1Q99986 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms