Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ABCA3Q99758 VMO1-203ENST00000416307 712 ntTSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 PTK7-212ENST00000476760 902 ntTSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 AC108725.1-201ENST00000495472 409 ntBASIC22.04■■□□□ 1.12
ABCA3Q99758 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 ZNF767P-206ENST00000513792 565 ntBASIC22.04■■□□□ 1.12
ABCA3Q99758 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC22.04■■□□□ 1.12
ABCA3Q99758 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC22.04■■□□□ 1.12
ABCA3Q99758 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC22.04■■□□□ 1.12
ABCA3Q99758 GPR182-203ENST00000622922 591 ntBASIC22.04■■□□□ 1.12
ABCA3Q99758 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC22.04■■□□□ 1.12
ABCA3Q99758 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 AL138688.1-201ENST00000624851 1594 ntBASIC22.04■■□□□ 1.12
ABCA3Q99758 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.03■■□□□ 1.12
ABCA3Q99758 TUBB8P12-201ENST00000308911 1335 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 TUBB1P2-201ENST00000422712 1306 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 TUBB7P-202ENST00000428444 1305 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 TUBB1P1-201ENST00000503144 1300 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 TUBB8P7-204ENST00000567960 1332 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ABCA3Q99758 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
ABCA3Q99758 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ABCA3Q99758 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC22.03■■□□□ 1.12
ABCA3Q99758 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC22.03■■□□□ 1.12
ABCA3Q99758 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC22.03■■□□□ 1.12
ABCA3Q99758 AC233724.13-201ENST00000598383 410 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.03■■□□□ 1.12
ABCA3Q99758 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
ABCA3Q99758 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 AC020907.1-201ENST00000616460 1350 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCA3Q99758 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC22.03■■□□□ 1.12
ABCA3Q99758 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
ABCA3Q99758 CTBP2P5-201ENST00000454986 1264 ntBASIC22.03■■□□□ 1.12
ABCA3Q99758 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC22.03■■□□□ 1.12
ABCA3Q99758 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC22.03■■□□□ 1.12
ABCA3Q99758 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
ABCA3Q99758 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.02■■□□□ 1.12
ABCA3Q99758 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ABCA3Q99758 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ABCA3Q99758 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.02■■□□□ 1.12
ABCA3Q99758 MIR1247-201ENST00000408206 136 ntBASIC22.02■■□□□ 1.12
ABCA3Q99758 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC22.02■■□□□ 1.12
ABCA3Q99758 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC22.02■■□□□ 1.12
ABCA3Q99758 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ABCA3Q99758 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC22.02■■□□□ 1.12
ABCA3Q99758 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCA3Q99758 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ABCA3Q99758 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ABCA3Q99758 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
ABCA3Q99758 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
ABCA3Q99758 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.01■■□□□ 1.11
ABCA3Q99758 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
ABCA3Q99758 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC22.01■■□□□ 1.11
ABCA3Q99758 CD74-212ENST00000524315 584 ntTSL 5 BASIC22.01■■□□□ 1.11
ABCA3Q99758 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC22.01■■□□□ 1.11
ABCA3Q99758 AC244093.1-201ENST00000610837 814 ntBASIC22.01■■□□□ 1.11
ABCA3Q99758 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.01■■□□□ 1.11
ABCA3Q99758 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
ABCA3Q99758 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCA3Q99758 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCA3Q99758 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.01■■□□□ 1.11
ABCA3Q99758 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
ABCA3Q99758 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.01■■□□□ 1.11
ABCA3Q99758 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCA3Q99758 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ABCA3Q99758 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 AL354751.1-201ENST00000412768 1863 ntBASIC22■■□□□ 1.11
ABCA3Q99758 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms