Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AL645728.1-201ENST00000366221 2101 ntBASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 AC004951.3-201ENST00000418645 1148 ntBASIC15.94■□□□□ 0.14
NR1H4Q96RI1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 KRT18P23-201ENST00000435622 1283 ntBASIC15.94■□□□□ 0.14
NR1H4Q96RI1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 MIR4651-201ENST00000582622 73 ntBASIC15.94■□□□□ 0.14
NR1H4Q96RI1 AC008687.5-201ENST00000593746 558 ntBASIC15.94■□□□□ 0.14
NR1H4Q96RI1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 KRT8P47-201ENST00000604727 1398 ntBASIC15.94■□□□□ 0.14
NR1H4Q96RI1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H4Q96RI1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 KSR1P1-201ENST00000446298 240 ntBASIC15.93■□□□□ 0.14
NR1H4Q96RI1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H4Q96RI1 AC067930.6-201ENST00000623257 4947 ntBASIC15.93■□□□□ 0.14
NR1H4Q96RI1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms