Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCHD1Q96NR3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 AC092068.3-201ENST00000587894 2016 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 RHOQP3-201ENST00000437982 621 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 AL513480.1-201ENST00000451731 511 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 AC004877.2-201ENST00000623941 599 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 BCAR1-209ENST00000546196 1340 ntBASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD1Q96NR3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 AC107918.2-201ENST00000530817 355 ntBASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 AC023141.13-201ENST00000604991 943 ntBASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCHD1Q96NR3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms