Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 AL391825.1-201ENST00000457671 1364 ntBASIC20.3■□□□□ 0.84
SNED1Q8TER0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 AC068880.1-201ENST00000507289 2297 ntBASIC20.3■□□□□ 0.84
SNED1Q8TER0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNED1Q8TER0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNED1Q8TER0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNED1Q8TER0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 MTND6P24-201ENST00000440466 518 ntBASIC20.29■□□□□ 0.84
SNED1Q8TER0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 SPTSSB-204ENST00000617024 1292 ntBASIC20.29■□□□□ 0.84
SNED1Q8TER0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNED1Q8TER0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNED1Q8TER0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNED1Q8TER0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 AC112492.5-201ENST00000421897 457 ntBASIC20.28■□□□□ 0.84
SNED1Q8TER0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SNED1Q8TER0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNED1Q8TER0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AP006294.1-201ENST00000415407 339 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 RPS2P32-201ENST00000439199 892 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC114501.2-201ENST00000439631 535 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC093004.1-201ENST00000508850 424 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC008494.3-201ENST00000606615 944 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 SLC7A15P-201ENST00000424028 1363 ntBASIC20.27■□□□□ 0.84
SNED1Q8TER0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNED1Q8TER0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.27■□□□□ 0.84
SNED1Q8TER0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.27■□□□□ 0.83
SNED1Q8TER0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNED1Q8TER0 AL606495.2-201ENST00000605867 535 ntBASIC20.27■□□□□ 0.83
SNED1Q8TER0 AC017083.2-201ENST00000608069 979 ntBASIC20.27■□□□□ 0.83
SNED1Q8TER0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNED1Q8TER0 AC067852.2-201ENST00000590513 2313 ntBASIC20.26■□□□□ 0.83
SNED1Q8TER0 SNX33P1-201ENST00000592116 1762 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms