Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 AC092364.2-201ENST00000596710 2692 ntBASIC18.04■□□□□ 0.48
LMO3Q8TAP4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.04■□□□□ 0.48
LMO3Q8TAP4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 PCDH8P1-201ENST00000428983 2773 ntBASIC18.03■□□□□ 0.48
LMO3Q8TAP4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 AC034105.1-201ENST00000563488 319 ntBASIC18.03■□□□□ 0.48
LMO3Q8TAP4 MIR4751-201ENST00000578027 74 ntBASIC18.03■□□□□ 0.48
LMO3Q8TAP4 MIR4515-201ENST00000584082 81 ntBASIC18.03■□□□□ 0.48
LMO3Q8TAP4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMO3Q8TAP4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 HMGA1P7-201ENST00000406908 502 ntBASIC18.02■□□□□ 0.48
LMO3Q8TAP4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 RHOQP3-201ENST00000437982 621 ntBASIC18.02■□□□□ 0.48
LMO3Q8TAP4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMO3Q8TAP4 Z83851.2-201ENST00000609564 659 ntBASIC18.02■□□□□ 0.48
LMO3Q8TAP4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 AC012569.1-201ENST00000591191 1524 ntBASIC18.02■□□□□ 0.47
LMO3Q8TAP4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LMO3Q8TAP4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMO3Q8TAP4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms