Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.88■□□□□ 0.29
LDB1Q86U70 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 KRT8P49-201ENST00000604166 1432 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 HLA-A-202ENST00000376806 1854 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB1Q86U70 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 KRT18P67-201ENST00000432816 1264 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB1Q86U70 AF186996.4-201ENST00000467186 377 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 RPS15P9-201ENST00000494093 319 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 SLC25A6P2-201ENST00000497974 877 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LDB1Q86U70 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.87■□□□□ 0.29
LDB1Q86U70 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.87■□□□□ 0.29
LDB1Q86U70 AC008735.5-201ENST00000623544 497 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LDB1Q86U70 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.87■□□□□ 0.29
LDB1Q86U70 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LDB1Q86U70 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 AC002310.6-201ENST00000624451 1377 ntBASIC16.87■□□□□ 0.29
LDB1Q86U70 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LDB1Q86U70 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LDB1Q86U70 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB1Q86U70 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB1Q86U70 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 TNRC18P3-201ENST00000441896 2691 ntBASIC16.86■□□□□ 0.29
LDB1Q86U70 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 MRPL3P1-201ENST00000400109 1033 ntBASIC16.86■□□□□ 0.29
LDB1Q86U70 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.86■□□□□ 0.29
LDB1Q86U70 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.86■□□□□ 0.29
LDB1Q86U70 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AP002469.2-201ENST00000531724 424 ntBASIC16.86■□□□□ 0.29
LDB1Q86U70 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 AL805961.1-202ENST00000641562 540 ntBASIC16.86■□□□□ 0.29
LDB1Q86U70 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LDB1Q86U70 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms