Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13BQ7Z7G8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 AC092552.1-201ENST00000547243 906 ntBASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 AC005412.3-201ENST00000580309 715 ntBASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
VPS13BQ7Z7G8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 BCYRN1-201ENST00000418539 200 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 MYCLP2-201ENST00000449268 967 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AL589739.1-201ENST00000607720 493 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 RPL37AP1-201ENST00000412502 279 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AC007967.4-201ENST00000614700 386 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AC108860.2-201ENST00000562760 2183 ntBASIC10.27□□□□□ -0.77
VPS13BQ7Z7G8 AC068880.1-201ENST00000507289 2297 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC018470.1-201ENST00000624790 3129 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AL513480.1-201ENST00000451731 511 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 FAM8A2P-201ENST00000528813 1142 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 SLC7A15P-201ENST00000424028 1363 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms