Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.7■□□□□ 0.74
GABPAQ06546 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.7■□□□□ 0.74
GABPAQ06546 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 AC073389.1-201ENST00000595595 795 ntBASIC19.7■□□□□ 0.74
GABPAQ06546 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.7■□□□□ 0.74
GABPAQ06546 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 AL645608.8-201ENST00000606034 2086 ntBASIC19.7■□□□□ 0.74
GABPAQ06546 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.7■□□□□ 0.74
GABPAQ06546 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
GABPAQ06546 UXT-AS1-201ENST00000590504 1525 ntBASIC19.7■□□□□ 0.74
GABPAQ06546 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GABPAQ06546 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABPAQ06546 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GABPAQ06546 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
GABPAQ06546 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
GABPAQ06546 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.69■□□□□ 0.74
GABPAQ06546 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.69■□□□□ 0.74
GABPAQ06546 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.69■□□□□ 0.74
GABPAQ06546 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.69■□□□□ 0.74
GABPAQ06546 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.69■□□□□ 0.74
GABPAQ06546 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.69■□□□□ 0.74
GABPAQ06546 AC142381.1-201ENST00000426099 345 ntBASIC19.69■□□□□ 0.74
GABPAQ06546 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.69■□□□□ 0.74
GABPAQ06546 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.69■□□□□ 0.74
GABPAQ06546 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GABPAQ06546 AC005498.2-205ENST00000593218 784 ntBASIC19.69■□□□□ 0.74
GABPAQ06546 RNF165-205ENST00000588679 2904 ntBASIC19.69■□□□□ 0.74
GABPAQ06546 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.69■□□□□ 0.74
GABPAQ06546 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 AC020763.4-201ENST00000623414 4170 ntBASIC19.69■□□□□ 0.74
GABPAQ06546 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABPAQ06546 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.68■□□□□ 0.74
GABPAQ06546 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.68■□□□□ 0.74
GABPAQ06546 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.68■□□□□ 0.74
GABPAQ06546 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.68■□□□□ 0.74
GABPAQ06546 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.68■□□□□ 0.74
GABPAQ06546 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.68■□□□□ 0.74
GABPAQ06546 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.68■□□□□ 0.74
GABPAQ06546 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.68■□□□□ 0.74
GABPAQ06546 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABPAQ06546 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.68■□□□□ 0.74
GABPAQ06546 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.67■□□□□ 0.74
GABPAQ06546 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GABPAQ06546 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
GABPAQ06546 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABPAQ06546 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.67■□□□□ 0.74
GABPAQ06546 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPAQ06546 FAM86GP-201ENST00000448322 971 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms