Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.27□□□□□ -0.77
HSPG2P98160 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HSPG2P98160 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
HSPG2P98160 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.26□□□□□ -0.77
HSPG2P98160 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 AC008687.7-202ENST00000637404 953 ntBASIC10.26□□□□□ -0.77
HSPG2P98160 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 POR-209ENST00000439269 1858 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.26□□□□□ -0.77
HSPG2P98160 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.26□□□□□ -0.77
HSPG2P98160 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.26□□□□□ -0.77
HSPG2P98160 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.26□□□□□ -0.77
HSPG2P98160 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.26□□□□□ -0.77
HSPG2P98160 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
HSPG2P98160 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC10.26□□□□□ -0.77
HSPG2P98160 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC10.26□□□□□ -0.77
HSPG2P98160 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.26□□□□□ -0.77
HSPG2P98160 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.26□□□□□ -0.77
HSPG2P98160 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 AC091167.2-201ENST00000579581 588 ntBASIC10.26□□□□□ -0.77
HSPG2P98160 GNRHR2-203ENST00000581100 1187 ntBASIC10.26□□□□□ -0.77
HSPG2P98160 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC10.26□□□□□ -0.77
HSPG2P98160 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HSPG2P98160 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 SLC25A24P2-201ENST00000415059 510 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 AC026954.1-201ENST00000429771 1293 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 LYSMD4-203ENST00000378904 2122 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
HSPG2P98160 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.25□□□□□ -0.77
HSPG2P98160 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
HSPG2P98160 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.25□□□□□ -0.77
HSPG2P98160 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.25□□□□□ -0.77
HSPG2P98160 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms