Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEP78395 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
PRAMEP78395 AC011270.2-201ENST00000624293 2550 ntBASIC17.08■□□□□ 0.32
PRAMEP78395 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRAMEP78395 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 AL021920.2-201ENST00000624828 1351 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 AP002414.1-201ENST00000391405 1147 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 AP002490.2-201ENST00000524791 560 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.07■□□□□ 0.32
PRAMEP78395 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRAMEP78395 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEP78395 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.07■□□□□ 0.32
PRAMEP78395 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEP78395 RNF216P1-203ENST00000404404 2427 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 PCDHB17P-201ENST00000539533 2393 ntBASIC17.07■□□□□ 0.32
PRAMEP78395 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEP78395 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 FLJ38576-201ENST00000623820 2459 ntBASIC17.06■□□□□ 0.32
PRAMEP78395 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEP78395 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEP78395 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEP78395 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEP78395 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEP78395 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEP78395 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEP78395 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEP78395 PCDH8P1-201ENST00000428983 2773 ntBASIC17.06■□□□□ 0.32
PRAMEP78395 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms