Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LMO4P61968 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO4P61968 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 AC141586.5-201ENST00000624546 2050 ntBASIC13.78□□□□□ -0.2
LMO4P61968 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 AL671710.1-201ENST00000610245 2349 ntBASIC13.78□□□□□ -0.2
LMO4P61968 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO4P61968 AC142381.1-201ENST00000426099 345 ntBASIC13.78□□□□□ -0.2
LMO4P61968 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO4P61968 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO4P61968 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO4P61968 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO4P61968 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO4P61968 MIR6080-201ENST00000617359 66 ntBASIC13.78□□□□□ -0.2
LMO4P61968 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.78□□□□□ -0.2
LMO4P61968 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LMO4P61968 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LMO4P61968 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LMO4P61968 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
LMO4P61968 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO4P61968 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.77□□□□□ -0.2
LMO4P61968 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LMO4P61968 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.77□□□□□ -0.21
LMO4P61968 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.77□□□□□ -0.21
LMO4P61968 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.77□□□□□ -0.21
LMO4P61968 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.77□□□□□ -0.21
LMO4P61968 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.77□□□□□ -0.21
LMO4P61968 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.77□□□□□ -0.21
LMO4P61968 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 AJ011932.1-201ENST00000621707 465 ntBASIC13.77□□□□□ -0.21
LMO4P61968 FO538757.1-201ENST00000623083 1397 ntBASIC13.77□□□□□ -0.21
LMO4P61968 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.77□□□□□ -0.21
LMO4P61968 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LMO4P61968 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LMO4P61968 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
LMO4P61968 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.76□□□□□ -0.21
LMO4P61968 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.76□□□□□ -0.21
LMO4P61968 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LMO4P61968 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LMO4P61968 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms