Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 AC002056.1-201ENST00000395613 760 ntBASIC19.02■□□□□ 0.64
USP11P51784 RPSAP43-201ENST00000402237 625 ntBASIC19.02■□□□□ 0.64
USP11P51784 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.02■□□□□ 0.64
USP11P51784 AC112191.1-201ENST00000523689 701 ntBASIC19.02■□□□□ 0.64
USP11P51784 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.02■□□□□ 0.64
USP11P51784 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 AC023511.2-201ENST00000618803 211 ntBASIC19.02■□□□□ 0.64
USP11P51784 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.02■□□□□ 0.64
USP11P51784 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
USP11P51784 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.02■□□□□ 0.63
USP11P51784 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP11P51784 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.01■□□□□ 0.63
USP11P51784 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 AL671710.1-201ENST00000610245 2349 ntBASIC19.01■□□□□ 0.63
USP11P51784 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP11P51784 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP11P51784 GPX1P2-201ENST00000429271 606 ntBASIC19.01■□□□□ 0.63
USP11P51784 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.01■□□□□ 0.63
USP11P51784 AC092865.5-201ENST00000545435 363 ntBASIC19.01■□□□□ 0.63
USP11P51784 AC005829.1-201ENST00000570002 483 ntBASIC19.01■□□□□ 0.63
USP11P51784 MIR3687-2-201ENST00000577708 61 ntBASIC19.01■□□□□ 0.63
USP11P51784 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.01■□□□□ 0.63
USP11P51784 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.01■□□□□ 0.63
USP11P51784 AL031055.1-201ENST00000606362 631 ntBASIC19.01■□□□□ 0.63
USP11P51784 MIR3687-1-201ENST00000614492 61 ntBASIC19.01■□□□□ 0.63
USP11P51784 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.01■□□□□ 0.63
USP11P51784 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
USP11P51784 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.01■□□□□ 0.63
USP11P51784 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP11P51784 AC078925.2-201ENST00000624013 1973 ntBASIC19.01■□□□□ 0.63
USP11P51784 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
USP11P51784 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 AD000864.1-201ENST00000624076 2295 ntBASIC19■□□□□ 0.63
USP11P51784 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
USP11P51784 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP11P51784 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP11P51784 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 COA5-202ENST00000409997 557 ntTSL 4 BASIC19■□□□□ 0.63
USP11P51784 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19■□□□□ 0.63
USP11P51784 ACTG1P14-201ENST00000446382 1122 ntBASIC19■□□□□ 0.63
USP11P51784 HLA-J-202ENST00000469281 1241 ntBASIC19■□□□□ 0.63
USP11P51784 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19■□□□□ 0.63
USP11P51784 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19■□□□□ 0.63
USP11P51784 AC091812.2-201ENST00000619081 385 ntBASIC19■□□□□ 0.63
USP11P51784 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19■□□□□ 0.63
USP11P51784 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
USP11P51784 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
USP11P51784 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP11P51784 AL603756.1-201ENST00000606511 2163 ntBASIC19■□□□□ 0.63
USP11P51784 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19■□□□□ 0.63
USP11P51784 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
USP11P51784 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms