Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.61■□□□□ 0.57
GPC3P51654 AC004835.2-201ENST00000603762 682 ntBASIC18.61■□□□□ 0.57
GPC3P51654 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 SLC22A20-204ENST00000530038 1673 ntBASIC18.6■□□□□ 0.57
GPC3P51654 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GPC3P51654 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.6■□□□□ 0.57
GPC3P51654 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GPC3P51654 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.6■□□□□ 0.57
GPC3P51654 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
GPC3P51654 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.6■□□□□ 0.57
GPC3P51654 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.6■□□□□ 0.57
GPC3P51654 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.6■□□□□ 0.57
GPC3P51654 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 AC060834.1-201ENST00000443027 2032 ntBASIC18.6■□□□□ 0.57
GPC3P51654 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 AC092053.1-201ENST00000605787 1936 ntBASIC18.6■□□□□ 0.57
GPC3P51654 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.6■□□□□ 0.57
GPC3P51654 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GPC3P51654 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GPC3P51654 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.59■□□□□ 0.57
GPC3P51654 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.59■□□□□ 0.57
GPC3P51654 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
GPC3P51654 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 AL671277.1-201ENST00000429656 993 ntBASIC18.59■□□□□ 0.57
GPC3P51654 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC3P51654 AC124947.2-201ENST00000547118 1133 ntBASIC18.59■□□□□ 0.57
GPC3P51654 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.59■□□□□ 0.57
GPC3P51654 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 AC022211.2-201ENST00000585075 2527 ntBASIC18.59■□□□□ 0.57
GPC3P51654 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.59■□□□□ 0.57
GPC3P51654 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GPC3P51654 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GPC3P51654 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.58■□□□□ 0.57
GPC3P51654 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms