Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.03■□□□□ 0.16
RORAP35398 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RORAP35398 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.03■□□□□ 0.16
RORAP35398 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.03■□□□□ 0.16
RORAP35398 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
RORAP35398 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.03■□□□□ 0.16
RORAP35398 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.03■□□□□ 0.16
RORAP35398 AL355385.1-201ENST00000606123 409 ntBASIC16.03■□□□□ 0.16
RORAP35398 AC099522.2-201ENST00000607001 744 ntBASIC16.03■□□□□ 0.16
RORAP35398 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.03■□□□□ 0.16
RORAP35398 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
RORAP35398 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RORAP35398 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RORAP35398 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RORAP35398 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RORAP35398 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.02■□□□□ 0.16
RORAP35398 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RORAP35398 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.02■□□□□ 0.16
RORAP35398 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.02■□□□□ 0.16
RORAP35398 AC004461.1-201ENST00000412461 403 ntBASIC16.02■□□□□ 0.16
RORAP35398 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.02■□□□□ 0.16
RORAP35398 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RORAP35398 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.02■□□□□ 0.16
RORAP35398 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.02■□□□□ 0.16
RORAP35398 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.02■□□□□ 0.16
RORAP35398 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RORAP35398 AC022145.2-201ENST00000598203 171 ntBASIC16.02■□□□□ 0.16
RORAP35398 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.02■□□□□ 0.16
RORAP35398 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.02■□□□□ 0.15
RORAP35398 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
RORAP35398 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
RORAP35398 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.02■□□□□ 0.15
RORAP35398 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
RORAP35398 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RORAP35398 TNRC18P3-201ENST00000441896 2691 ntBASIC16.02■□□□□ 0.15
RORAP35398 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RORAP35398 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RORAP35398 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.01■□□□□ 0.15
RORAP35398 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.01■□□□□ 0.15
RORAP35398 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.01■□□□□ 0.15
RORAP35398 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RORAP35398 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.01■□□□□ 0.15
RORAP35398 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.01■□□□□ 0.15
RORAP35398 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RORAP35398 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.01■□□□□ 0.15
RORAP35398 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.01■□□□□ 0.15
RORAP35398 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.01■□□□□ 0.15
RORAP35398 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms