Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.85■□□□□ 0.13
CHMP24386 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.85■□□□□ 0.13
CHMP24386 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CHMP24386 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.84■□□□□ 0.13
CHMP24386 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 AC003669.1-201ENST00000334569 611 ntBASIC15.84■□□□□ 0.13
CHMP24386 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 SPDYE21P-201ENST00000413323 827 ntBASIC15.84■□□□□ 0.13
CHMP24386 PRYP5-201ENST00000451909 266 ntBASIC15.84■□□□□ 0.13
CHMP24386 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
CHMP24386 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 RNPS1P1-201ENST00000507437 918 ntBASIC15.84■□□□□ 0.13
CHMP24386 AC124947.2-201ENST00000547118 1133 ntBASIC15.84■□□□□ 0.13
CHMP24386 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.84■□□□□ 0.13
CHMP24386 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.84■□□□□ 0.13
CHMP24386 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.84■□□□□ 0.13
CHMP24386 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHMP24386 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.83■□□□□ 0.13
CHMP24386 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
CHMP24386 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.83■□□□□ 0.13
CHMP24386 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHMP24386 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.83■□□□□ 0.13
CHMP24386 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 RPS2P28-201ENST00000314255 741 ntBASIC15.83■□□□□ 0.12
CHMP24386 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.83■□□□□ 0.12
CHMP24386 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 AL020989.1-201ENST00000422979 469 ntBASIC15.83■□□□□ 0.12
CHMP24386 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.83■□□□□ 0.12
CHMP24386 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.83■□□□□ 0.12
CHMP24386 AC093909.1-201ENST00000504731 1122 ntBASIC15.83■□□□□ 0.12
CHMP24386 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.83■□□□□ 0.12
CHMP24386 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.83■□□□□ 0.12
CHMP24386 SART3-203ENST00000546611 1184 ntBASIC15.83■□□□□ 0.12
CHMP24386 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.83■□□□□ 0.12
CHMP24386 NKAPP1-205ENST00000585790 367 ntBASIC15.83■□□□□ 0.12
CHMP24386 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.83■□□□□ 0.12
CHMP24386 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.83■□□□□ 0.12
CHMP24386 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
CHMP24386 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CHMP24386 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.83■□□□□ 0.12
CHMP24386 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.83■□□□□ 0.12
CHMP24386 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.83■□□□□ 0.12
CHMP24386 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHMP24386 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.83■□□□□ 0.12
CHMP24386 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms