Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 AC079781.4-201ENST00000641908 219 ntBASIC18.91■□□□□ 0.62
CYP3A4P08684 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CYP3A4P08684 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CYP3A4P08684 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.9■□□□□ 0.62
CYP3A4P08684 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CYP3A4P08684 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CYP3A4P08684 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.9■□□□□ 0.62
CYP3A4P08684 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.9■□□□□ 0.62
CYP3A4P08684 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 RN7SL589P-201ENST00000481268 310 ntBASIC18.9■□□□□ 0.62
CYP3A4P08684 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AL135744.1-201ENST00000565098 629 ntBASIC18.9■□□□□ 0.62
CYP3A4P08684 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.9■□□□□ 0.62
CYP3A4P08684 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.9■□□□□ 0.62
CYP3A4P08684 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CYP3A4P08684 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.9■□□□□ 0.62
CYP3A4P08684 AC022211.2-201ENST00000585075 2527 ntBASIC18.9■□□□□ 0.62
CYP3A4P08684 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.9■□□□□ 0.62
CYP3A4P08684 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CYP3A4P08684 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CYP3A4P08684 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
CYP3A4P08684 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CYP3A4P08684 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CYP3A4P08684 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 AC004461.1-201ENST00000412461 403 ntBASIC18.89■□□□□ 0.61
CYP3A4P08684 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CYP3A4P08684 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.89■□□□□ 0.61
CYP3A4P08684 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 RNF216P1-203ENST00000404404 2427 ntBASIC18.89■□□□□ 0.61
CYP3A4P08684 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CYP3A4P08684 AC016027.1-202ENST00000607927 1699 ntBASIC18.89■□□□□ 0.61
CYP3A4P08684 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CYP3A4P08684 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CYP3A4P08684 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP3A4P08684 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
CYP3A4P08684 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.88■□□□□ 0.61
CYP3A4P08684 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 RPS8P6-201ENST00000426177 609 ntBASIC18.88■□□□□ 0.61
CYP3A4P08684 SPDYE11-202ENST00000450699 704 ntBASIC18.88■□□□□ 0.61
CYP3A4P08684 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.88■□□□□ 0.61
CYP3A4P08684 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CYP3A4P08684 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP3A4P08684 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CYP3A4P08684 LINC01225-203ENST00000563550 1244 ntBASIC18.88■□□□□ 0.61
CYP3A4P08684 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.88■□□□□ 0.61
CYP3A4P08684 SPDYE9P-201ENST00000570642 692 ntBASIC18.88■□□□□ 0.61
CYP3A4P08684 SPDYE10P-202ENST00000612005 668 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms