Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.04■□□□□ -0
ERCC1P07992 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.04■□□□□ -0
ERCC1P07992 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 MRPL3P1-201ENST00000400109 1033 ntBASIC15.04■□□□□ -0
ERCC1P07992 AL590627.1-203ENST00000421194 1026 ntBASIC15.04■□□□□ -0
ERCC1P07992 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.04■□□□□ -0
ERCC1P07992 AC124947.2-201ENST00000547118 1133 ntBASIC15.04■□□□□ -0
ERCC1P07992 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.04■□□□□ -0
ERCC1P07992 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
ERCC1P07992 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ERCC1P07992 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
ERCC1P07992 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.04■□□□□ -0
ERCC1P07992 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ERCC1P07992 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 AGGF1P2-201ENST00000426656 2106 ntBASIC15.04■□□□□ -0
ERCC1P07992 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERCC1P07992 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.03■□□□□ -0
ERCC1P07992 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 HLA-A-201ENST00000376802 1334 ntBASIC15.03■□□□□ -0
ERCC1P07992 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.03■□□□□ -0
ERCC1P07992 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.03■□□□□ -0
ERCC1P07992 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.03■□□□□ -0
ERCC1P07992 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 BX640515.1-201ENST00000617215 977 ntBASIC15.03■□□□□ -0
ERCC1P07992 TP73-AS1-207ENST00000624167 988 ntBASIC15.03■□□□□ -0
ERCC1P07992 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.03■□□□□ -0
ERCC1P07992 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.03■□□□□ -0
ERCC1P07992 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 CICP6-201ENST00000457191 2729 ntBASIC15.03■□□□□ -0
ERCC1P07992 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
ERCC1P07992 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.03■□□□□ -0
ERCC1P07992 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ERCC1P07992 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERCC1P07992 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.02■□□□□ -0
ERCC1P07992 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ERCC1P07992 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms