Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM3O75382 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM3O75382 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 FLJ38576-201ENST00000623820 2459 ntBASIC15.83■□□□□ 0.12
TRIM3O75382 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM3O75382 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM3O75382 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM3O75382 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM3O75382 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM3O75382 RPL13AP23-201ENST00000480739 586 ntBASIC15.82■□□□□ 0.12
TRIM3O75382 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM3O75382 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM3O75382 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM3O75382 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM3O75382 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 AF228730.7-201ENST00000641842 219 ntBASIC15.82■□□□□ 0.12
TRIM3O75382 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM3O75382 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM3O75382 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM3O75382 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 AC007326.2-201ENST00000624224 7579 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM3O75382 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM3O75382 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 LYSMD4-203ENST00000378904 2122 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 LINC00982-205ENST00000420957 435 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 ACTG1P4-201ENST00000425123 1122 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 AC136632.2-201ENST00000512891 861 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
TRIM3O75382 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM3O75382 AC145285.3-201ENST00000564603 959 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 AL353135.1-201ENST00000606729 504 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 MIR1199-201ENST00000621445 119 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 AC117500.6-201ENST00000624871 588 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 PGM5P2-202ENST00000637225 1043 ntBASIC15.81■□□□□ 0.12
TRIM3O75382 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 CROCCP2-202ENST00000412962 2773 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms