Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC096633.1-201ENST00000422446 749 ntBASIC16.84■□□□□ 0.29
KLHL41O60662 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 MTCL1P1-201ENST00000446207 792 ntBASIC16.84■□□□□ 0.29
KLHL41O60662 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
KLHL41O60662 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 HYMAI-201ENST00000635591 3347 ntBASIC16.84■□□□□ 0.29
KLHL41O60662 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
KLHL41O60662 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL41O60662 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.83■□□□□ 0.29
KLHL41O60662 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL41O60662 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL41O60662 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.83■□□□□ 0.29
KLHL41O60662 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KLHL41O60662 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL41O60662 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 NUS1P2-201ENST00000417358 873 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL41O60662 AC079781.3-201ENST00000449110 356 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 AC009078.2-202ENST00000463353 338 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 AC093909.1-201ENST00000504731 1122 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.83■□□□□ 0.28
KLHL41O60662 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.83■□□□□ 0.28
KLHL41O60662 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 AL591684.3-201ENST00000605187 298 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KLHL41O60662 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL41O60662 AC092364.2-201ENST00000596710 2692 ntBASIC16.83■□□□□ 0.28
KLHL41O60662 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL41O60662 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 AC010460.3-201ENST00000511359 1579 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 AL022342.1-201ENST00000400363 863 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 AC124947.2-201ENST00000547118 1133 ntBASIC16.82■□□□□ 0.28
KLHL41O60662 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.82■□□□□ 0.28
KLHL41O60662 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.82■□□□□ 0.28
KLHL41O60662 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL41O60662 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KLHL41O60662 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms