Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EXTL3O43909 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 HMGA1P7-201ENST00000406908 502 ntBASIC18.29■□□□□ 0.52
EXTL3O43909 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.29■□□□□ 0.52
EXTL3O43909 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.29■□□□□ 0.52
EXTL3O43909 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.29■□□□□ 0.52
EXTL3O43909 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.29■□□□□ 0.52
EXTL3O43909 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
EXTL3O43909 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.29■□□□□ 0.52
EXTL3O43909 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.29■□□□□ 0.52
EXTL3O43909 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.29■□□□□ 0.52
EXTL3O43909 AL513190.1-201ENST00000621254 727 ntBASIC18.29■□□□□ 0.52
EXTL3O43909 AC092865.6-201ENST00000642101 219 ntBASIC18.29■□□□□ 0.52
EXTL3O43909 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.29■□□□□ 0.52
EXTL3O43909 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.29■□□□□ 0.52
EXTL3O43909 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.29■□□□□ 0.52
EXTL3O43909 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EXTL3O43909 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.29■□□□□ 0.52
EXTL3O43909 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 AL603756.1-201ENST00000606511 2163 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
EXTL3O43909 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 SNX33P1-201ENST00000592116 1762 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EXTL3O43909 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.28■□□□□ 0.52
EXTL3O43909 PDPK2P-202ENST00000562415 1191 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 AC040169.1-201ENST00000565382 521 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.28■□□□□ 0.52
EXTL3O43909 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.28■□□□□ 0.52
EXTL3O43909 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.28■□□□□ 0.52
EXTL3O43909 AL691403.2-201ENST00000618460 490 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 AC055717.3-201ENST00000622967 595 ntBASIC18.28■□□□□ 0.52
EXTL3O43909 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.28■□□□□ 0.52
EXTL3O43909 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.28■□□□□ 0.52
EXTL3O43909 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXTL3O43909 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EXTL3O43909 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
EXTL3O43909 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
EXTL3O43909 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EXTL3O43909 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.27■□□□□ 0.52
EXTL3O43909 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.27■□□□□ 0.52
EXTL3O43909 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
EXTL3O43909 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.27■□□□□ 0.52
EXTL3O43909 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.27■□□□□ 0.52
EXTL3O43909 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.52
EXTL3O43909 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.27■□□□□ 0.52
EXTL3O43909 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EXTL3O43909 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
EXTL3O43909 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
EXTL3O43909 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.27■□□□□ 0.51
EXTL3O43909 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EXTL3O43909 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms