Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRGAP3O43295 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 PCDHA12-202ENST00000613593 2588 ntBASIC20.92■□□□□ 0.94
SRGAP3O43295 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.92■□□□□ 0.94
SRGAP3O43295 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 AD000864.1-201ENST00000624076 2295 ntBASIC20.92■□□□□ 0.94
SRGAP3O43295 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.92■□□□□ 0.94
SRGAP3O43295 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.92■□□□□ 0.94
SRGAP3O43295 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.92■□□□□ 0.94
SRGAP3O43295 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.92■□□□□ 0.94
SRGAP3O43295 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.92■□□□□ 0.94
SRGAP3O43295 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 AC068137.2-201ENST00000605408 478 ntBASIC20.92■□□□□ 0.94
SRGAP3O43295 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.92■□□□□ 0.94
SRGAP3O43295 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SRGAP3O43295 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SRGAP3O43295 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.92■□□□□ 0.94
SRGAP3O43295 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SRGAP3O43295 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 AC078925.2-201ENST00000624013 1973 ntBASIC20.92■□□□□ 0.94
SRGAP3O43295 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.92■□□□□ 0.94
SRGAP3O43295 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRGAP3O43295 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SRGAP3O43295 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
SRGAP3O43295 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SRGAP3O43295 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SRGAP3O43295 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SRGAP3O43295 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.91■□□□□ 0.94
SRGAP3O43295 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SRGAP3O43295 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
SRGAP3O43295 AC010327.4-202ENST00000591484 748 ntBASIC20.91■□□□□ 0.94
SRGAP3O43295 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.91■□□□□ 0.94
SRGAP3O43295 MTDHP5-201ENST00000598980 586 ntBASIC20.91■□□□□ 0.94
SRGAP3O43295 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.91■□□□□ 0.94
SRGAP3O43295 AP001350.2-201ENST00000625104 1094 ntBASIC20.91■□□□□ 0.94
SRGAP3O43295 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.91■□□□□ 0.94
SRGAP3O43295 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRGAP3O43295 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SRGAP3O43295 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.9■□□□□ 0.94
SRGAP3O43295 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.9■□□□□ 0.94
SRGAP3O43295 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.9■□□□□ 0.94
SRGAP3O43295 AP002490.2-201ENST00000524791 560 ntBASIC20.9■□□□□ 0.94
SRGAP3O43295 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.9■□□□□ 0.94
SRGAP3O43295 AP002472.1-201ENST00000577490 586 ntBASIC20.9■□□□□ 0.94
SRGAP3O43295 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 AL603756.1-201ENST00000606511 2163 ntBASIC20.9■□□□□ 0.94
SRGAP3O43295 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SRGAP3O43295 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SRGAP3O43295 SNX33P1-201ENST00000592116 1762 ntBASIC20.9■□□□□ 0.94
SRGAP3O43295 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRGAP3O43295 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.9■□□□□ 0.94
SRGAP3O43295 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.89■□□□□ 0.94
SRGAP3O43295 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SRGAP3O43295 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SRGAP3O43295 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRGAP3O43295 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SRGAP3O43295 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms