Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX1O00570 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX1O00570 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.76■□□□□ 0.43
SOX1O00570 NOC2LP1-202ENST00000452600 2235 ntBASIC17.76■□□□□ 0.43
SOX1O00570 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX1O00570 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX1O00570 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX1O00570 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.75■□□□□ 0.43
SOX1O00570 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX1O00570 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.75■□□□□ 0.43
SOX1O00570 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.75■□□□□ 0.43
SOX1O00570 SDHAP3-202ENST00000515467 728 ntBASIC17.75■□□□□ 0.43
SOX1O00570 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 MIR5189-201ENST00000577370 114 ntBASIC17.75■□□□□ 0.43
SOX1O00570 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.75■□□□□ 0.43
SOX1O00570 AL022328.1-201ENST00000610050 478 ntBASIC17.75■□□□□ 0.43
SOX1O00570 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.75■□□□□ 0.43
SOX1O00570 AL033527.5-202ENST00000641632 1098 ntBASIC17.75■□□□□ 0.43
SOX1O00570 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 LINC00896-202ENST00000609602 2128 ntBASIC17.75■□□□□ 0.43
SOX1O00570 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SOX1O00570 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX1O00570 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX1O00570 KRT8P19-201ENST00000551916 1455 ntBASIC17.75■□□□□ 0.43
SOX1O00570 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX1O00570 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX1O00570 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX1O00570 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.74■□□□□ 0.43
SOX1O00570 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.74■□□□□ 0.43
SOX1O00570 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SOX1O00570 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.74■□□□□ 0.43
SOX1O00570 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX1O00570 RRP7BP-205ENST00000566851 833 ntBASIC17.74■□□□□ 0.43
SOX1O00570 RN7SL560P-201ENST00000577943 264 ntBASIC17.74■□□□□ 0.43
SOX1O00570 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SOX1O00570 MIR7845-201ENST00000618396 99 ntBASIC17.74■□□□□ 0.43
SOX1O00570 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX1O00570 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SOX1O00570 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX1O00570 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX1O00570 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 FLJ13224-201ENST00000313737 1514 ntBASIC17.73■□□□□ 0.43
SOX1O00570 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX1O00570 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX1O00570 UPF3AP2-201ENST00000457924 1132 ntBASIC17.73■□□□□ 0.43
SOX1O00570 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 RNA5SP410-201ENST00000516285 106 ntBASIC17.73■□□□□ 0.43
SOX1O00570 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.73■□□□□ 0.43
SOX1O00570 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX1O00570 AC025048.3-201ENST00000590609 569 ntBASIC17.73■□□□□ 0.43
SOX1O00570 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.73■□□□□ 0.43
SOX1O00570 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms