Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 YBX1P6-201ENST00000442962 1002 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 AC079316.1-201ENST00000548397 411 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 AC105129.2-201ENST00000559536 390 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 MIR6727-201ENST00000620702 65 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 CU634019.7-201ENST00000624153 1185 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 FP236241.2-201ENST00000624906 1185 ntBASIC20.97■□□□□ 0.95
RGPD3A6NKT7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RGPD3A6NKT7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RGPD3A6NKT7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 AC138028.4-201ENST00000564984 1845 ntBASIC20.95■□□□□ 0.94
RGPD3A6NKT7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 ACTG1P3-201ENST00000431775 1114 ntBASIC20.95■□□□□ 0.94
RGPD3A6NKT7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 AC010328.2-201ENST00000597698 1111 ntBASIC20.95■□□□□ 0.94
RGPD3A6NKT7 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.95■□□□□ 0.94
RGPD3A6NKT7 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
RGPD3A6NKT7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms