Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 AL157384.1-201ENST00000445995 2473 ntBASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 AL359711.2-201ENST00000563105 872 ntBASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 HADH-212ENST00000638621 741 ntTSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RIMBP3Q9UFD9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 AC012441.1-201ENST00000446669 685 ntBASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 MSTO2P-201ENST00000314835 1709 ntBASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 KRTAP19-9P-201ENST00000421795 191 ntBASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIMBP3Q9UFD9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 HNRNPA1P32-201ENST00000396326 963 ntBASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 AP001505.2-201ENST00000616815 443 ntBASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 AC079336.7-201ENST00000623428 1078 ntBASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIMBP3Q9UFD9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 EEF1DP1-201ENST00000585891 896 ntBASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIMBP3Q9UFD9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 FGFR3P5-201ENST00000564496 886 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC061975.2-201ENST00000581722 295 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 MPDU1-223ENST00000582151 728 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms