Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 CA15P1-201ENST00000481698 905 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 SLC25A1P4-201ENST00000567977 778 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 MIR3180-5-201ENST00000583743 153 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 AL137246.1-201ENST00000607072 977 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 AC005785.2-201ENST00000624655 631 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4Q9NQC3 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.07■□□□□ 0.8
RTN4Q9NQC3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4Q9NQC3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 AC009102.3-201ENST00000623118 1491 ntBASIC20.05■□□□□ 0.8
RTN4Q9NQC3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 Z95114.2-201ENST00000623490 2205 ntBASIC20.05■□□□□ 0.8
RTN4Q9NQC3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 MIR149-201ENST00000384879 89 ntBASIC20.05■□□□□ 0.8
RTN4Q9NQC3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 CD99P1-205ENST00000527459 561 ntBASIC20.05■□□□□ 0.8
RTN4Q9NQC3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms