Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 LINC02012-201ENST00000608206 1725 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AC105021.1-202ENST00000570572 669 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AC140912.1-201ENST00000577171 1054 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL133215.2-201ENST00000609242 977 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL008721.1-201ENST00000609964 604 ntBASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH11XQ9BZA7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RNA5SP410-201ENST00000516285 106 ntBASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH11XQ9BZA7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 ZNF890P-202ENST00000530367 1156 ntBASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 API5-211ENST00000534695 560 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 AL359881.2-201ENST00000602973 570 ntBASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 AL671710.1-201ENST00000610245 2349 ntBASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 AC006277.1-201ENST00000624348 1610 ntBASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH11XQ9BZA7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 AL079307.3-201ENST00000556114 283 ntBASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH11XQ9BZA7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms