Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 MIR574-201ENST00000385209 96 ntBASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 POLD2P1-201ENST00000511220 997 ntBASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 AC136632.2-201ENST00000512891 861 ntBASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TERC-201ENST00000602385 541 ntBASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 AP001094.4-201ENST00000579008 2176 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 Z83851.2-201ENST00000609564 659 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 AL139327.4-201ENST00000612362 153 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 PGM5P2-202ENST00000637225 1043 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 AC046185.3-201ENST00000623228 1824 ntBASIC14.25□□□□□ -0.13
PCGF1Q9BSM1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.24□□□□□ -0.13
PCGF1Q9BSM1 ELK2BP-201ENST00000415014 1224 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms