Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.05■□□□□ 0
SPENQ96T58 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.05■□□□□ -0
SPENQ96T58 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.05■□□□□ -0
SPENQ96T58 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.05■□□□□ -0
SPENQ96T58 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SPENQ96T58 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.05■□□□□ -0
SPENQ96T58 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 AC134043.2-201ENST00000624206 2238 ntBASIC15.05■□□□□ -0
SPENQ96T58 AC005332.8-201ENST00000622750 2735 ntBASIC15.05■□□□□ -0
SPENQ96T58 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.05■□□□□ -0
SPENQ96T58 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 AL023806.1-201ENST00000603994 1649 ntBASIC15.05■□□□□ -0
SPENQ96T58 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.05■□□□□ -0
SPENQ96T58 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.05■□□□□ -0
SPENQ96T58 RN7SL837P-201ENST00000463010 287 ntBASIC15.05■□□□□ -0
SPENQ96T58 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.05■□□□□ -0
SPENQ96T58 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.05■□□□□ -0
SPENQ96T58 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.05■□□□□ -0
SPENQ96T58 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SPENQ96T58 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.05■□□□□ -0
SPENQ96T58 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.05■□□□□ -0
SPENQ96T58 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPENQ96T58 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.04■□□□□ -0
SPENQ96T58 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 AC099568.2-201ENST00000609194 695 ntBASIC15.04■□□□□ -0
SPENQ96T58 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 BTBD7P1-201ENST00000447253 1453 ntBASIC15.04■□□□□ -0
SPENQ96T58 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.04■□□□□ -0
SPENQ96T58 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 FRMD8P1-201ENST00000440433 1524 ntBASIC15.04■□□□□ -0
SPENQ96T58 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.04■□□□□ -0
SPENQ96T58 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SPENQ96T58 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 PCDHB17P-201ENST00000539533 2393 ntBASIC15.04■□□□□ -0
SPENQ96T58 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.04■□□□□ -0
SPENQ96T58 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPENQ96T58 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 BNIP3P42-201ENST00000454982 569 ntBASIC15.03■□□□□ -0
SPENQ96T58 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 BNIP3P29-201ENST00000598302 571 ntBASIC15.03■□□□□ -0
SPENQ96T58 AC011447.5-201ENST00000616168 564 ntBASIC15.03■□□□□ -0
SPENQ96T58 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.03■□□□□ -0
SPENQ96T58 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPENQ96T58 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.03■□□□□ -0
SPENQ96T58 SLC25A1P3-201ENST00000395415 828 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms