Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 HCG4-201ENST00000418983 998 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AC087641.1-201ENST00000557561 1021 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 SPCS2P1-201ENST00000561636 679 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AC011467.4-201ENST00000594891 528 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AKAP8P1-201ENST00000434743 1349 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 AC016027.1-202ENST00000607927 1699 ntBASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC85AQ96PX6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 AC091167.2-201ENST00000579581 588 ntBASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 AC092364.2-202ENST00000597012 1073 ntBASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC85AQ96PX6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 KRT8P49-201ENST00000604166 1432 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 BCRP1-201ENST00000444246 691 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 AC109635.5-201ENST00000533593 962 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 SLC25A39P2-201ENST00000537614 270 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 AL138918.1-201ENST00000568306 659 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 MIR3197-201ENST00000582241 73 ntBASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 LINC02012-201ENST00000608206 1725 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms