Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 MIR3909-201ENST00000579518 119 ntBASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AL009183.1-201ENST00000603760 355 ntBASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 AL031055.1-201ENST00000606362 631 ntBASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCD1Q96GM5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 CEND1P1-201ENST00000451006 455 ntBASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AC109635.5-201ENST00000533593 962 ntBASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 AL691403.2-201ENST00000618460 490 ntBASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMARCD1Q96GM5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 PMS2P4-201ENST00000412466 1052 ntBASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 AC134684.3-201ENST00000641758 218 ntBASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCD1Q96GM5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 AP006288.1-201ENST00000446065 395 ntBASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms