Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 AC008735.5-201ENST00000623544 497 ntBASIC17.49■□□□□ 0.39
IFT43Q96FT9 AL022326.1-202ENST00000641533 845 ntBASIC17.49■□□□□ 0.39
IFT43Q96FT9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 PMS2P7-201ENST00000506558 1336 ntBASIC17.48■□□□□ 0.39
IFT43Q96FT9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 MTDHP4-201ENST00000600287 670 ntBASIC17.48■□□□□ 0.39
IFT43Q96FT9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 AC107918.4-202ENST00000641623 219 ntBASIC17.48■□□□□ 0.39
IFT43Q96FT9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IFT43Q96FT9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IFT43Q96FT9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 KRT18P13-201ENST00000400056 1290 ntBASIC17.47■□□□□ 0.39
IFT43Q96FT9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 PRYP5-201ENST00000451909 266 ntBASIC17.47■□□□□ 0.39
IFT43Q96FT9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
IFT43Q96FT9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IFT43Q96FT9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms