Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 FAM197Y3-203ENST00000618346 717 ntBASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 AL671710.1-201ENST00000610245 2349 ntBASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 AC211486.1-202ENST00000416371 468 ntBASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 AC211476.1-201ENST00000503899 468 ntBASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM3Q8TF72 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 GGT4P-201ENST00000623672 1708 ntBASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AL391256.1-201ENST00000443260 1855 ntBASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 MED15P5-201ENST00000423150 992 ntBASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.19■□□□□ 0.34
SHROOM3Q8TF72 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 AL353732.1-201ENST00000569618 1459 ntBASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 AL591424.1-201ENST00000442569 1213 ntBASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 COX20P2-201ENST00000452636 358 ntBASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 MIR3687-2-201ENST00000577708 61 ntBASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 CYP2A7P1-201ENST00000595391 815 ntBASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHROOM3Q8TF72 MIR3687-1-201ENST00000614492 61 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms