Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 NKILA-202ENST00000614771 2598 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 AC108073.2-201ENST00000464002 357 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 AC092865.6-201ENST00000642101 219 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 AC106886.4-201ENST00000623557 2502 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 NCF1C-201ENST00000438382 1427 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 AC097637.2-201ENST00000624096 1997 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 AL355385.1-201ENST00000606123 409 ntBASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC33Q8N5R6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 HMGN1P19-201ENST00000436976 333 ntBASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 VN2R19P-201ENST00000442399 1052 ntBASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 RPS15P9-201ENST00000494093 319 ntBASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 AC004790.2-201ENST00000623588 572 ntBASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 LINC02012-201ENST00000608206 1725 ntBASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC33Q8N5R6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC33Q8N5R6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC33Q8N5R6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms