Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AP006294.1-201ENST00000415407 339 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 DFFBP1-201ENST00000433250 979 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AC114501.2-201ENST00000439631 535 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AC098850.1-201ENST00000419919 790 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 KRT17P7-201ENST00000451704 1104 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 AC008494.3-201ENST00000606615 944 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 GGT4P-201ENST00000623672 1708 ntBASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL27A1Q8IZC6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SPDYE19P-201ENST00000338590 713 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 GNAQP1-201ENST00000444815 1067 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 AL589987.1-201ENST00000453380 819 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 GPR53P-205ENST00000457298 1084 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 AL359881.2-201ENST00000602973 570 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL27A1Q8IZC6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms