Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AC254562.1-201ENST00000417586 456 ntBASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AC140658.5-201ENST00000438532 169 ntBASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 DUX4L17-201ENST00000557360 1267 ntBASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 KRT8P49-201ENST00000604166 1432 ntBASIC17.81■□□□□ 0.44
SCN4BQ8IWT1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 SLC22A20-204ENST00000530038 1673 ntBASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 CNN2P11-201ENST00000429351 262 ntBASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 AC091167.2-201ENST00000579581 588 ntBASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
SCN4BQ8IWT1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 HCG4-201ENST00000418983 998 ntBASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms