Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 RN7SL589P-201ENST00000481268 310 ntBASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 AKAP8P1-201ENST00000434743 1349 ntBASIC18.73■□□□□ 0.59
CCDC60Q8IWA6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 AL671710.1-201ENST00000610245 2349 ntBASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 LINC00895-201ENST00000629028 1637 ntBASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 PMS2P4-201ENST00000412466 1052 ntBASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 AL627223.1-201ENST00000416693 442 ntBASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 AC023141.5-201ENST00000458585 616 ntBASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC60Q8IWA6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AC006277.1-201ENST00000624348 1610 ntBASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 SPCS2P4-201ENST00000436160 681 ntBASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 WASH6P-202ENST00000359512 1437 ntBASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 AP001094.4-201ENST00000579008 2176 ntBASIC18.71■□□□□ 0.59
CCDC60Q8IWA6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC016027.1-202ENST00000607927 1699 ntBASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AL592309.1-201ENST00000443127 649 ntBASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC069335.1-201ENST00000489972 472 ntBASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC013467.2-201ENST00000605472 835 ntBASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AC093028.1-201ENST00000622998 982 ntBASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC60Q8IWA6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms