Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 AC016027.1-202ENST00000607927 1699 ntBASIC21■□□□□ 0.95
UBE3BQ7Z3V4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 FAM58DP-201ENST00000428076 619 ntBASIC21■□□□□ 0.95
UBE3BQ7Z3V4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 AL671710.1-201ENST00000610245 2349 ntBASIC21■□□□□ 0.95
UBE3BQ7Z3V4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21■□□□□ 0.95
UBE3BQ7Z3V4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 LINC01225-203ENST00000563550 1244 ntBASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 AC004449.1-201ENST00000564240 433 ntBASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 LINC00628-201ENST00000628516 1289 ntBASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE3BQ7Z3V4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 LINC00895-201ENST00000629028 1637 ntBASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 AC138932.1-201ENST00000534164 6830 ntBASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE3BQ7Z3V4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 KRT18P32-201ENST00000424695 1287 ntBASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE3BQ7Z3V4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms