Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 AC008687.5-201ENST00000593746 558 ntBASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.54■□□□□ 0.72
PDZRN4Q6ZMN7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AL845331.1-201ENST00000424978 1190 ntBASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 VENTXP7-201ENST00000475503 772 ntBASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 FOSL1P1-201ENST00000511041 816 ntBASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AC091304.2-201ENST00000564639 760 ntBASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AL732292.2-201ENST00000609649 430 ntBASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.53■□□□□ 0.72
PDZRN4Q6ZMN7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 LINC00167-201ENST00000530583 1419 ntBASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 KRT17P6-201ENST00000453795 1220 ntBASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 AC004263.2-201ENST00000617183 678 ntBASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDZRN4Q6ZMN7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDZRN4Q6ZMN7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PDZRN4Q6ZMN7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDZRN4Q6ZMN7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 AC144831.1-201ENST00000573312 2656 ntBASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 AC126177.1-201ENST00000547829 2218 ntBASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PDZRN4Q6ZMN7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms