Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL138918.1-201ENST00000568306 659 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AL096865.1-201ENST00000606796 927 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC084121.4-201ENST00000641598 221 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AF228730.8-201ENST00000642140 221 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 PKD1P1-201ENST00000458669 6805 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SLC25A39P2-201ENST00000537614 270 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC069262.1-201ENST00000539058 672 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC026150.2-201ENST00000564693 1156 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC051619.7-201ENST00000568314 623 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 MIR3909-201ENST00000579518 119 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AP001350.2-201ENST00000625104 1094 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AP001002.2-201ENST00000625137 386 ntBASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNFT1Q5M7Z0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 AC108860.2-201ENST00000562760 2183 ntBASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 SPDYE14P-201ENST00000442619 822 ntBASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 CNN2P2-201ENST00000443536 909 ntBASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 CNN2P3-201ENST00000450201 906 ntBASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.15■□□□□ 0.02
RNFT1Q5M7Z0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms