Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAPQ12770 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAPQ12770 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAPQ12770 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAPQ12770 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAPQ12770 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAPQ12770 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAPQ12770 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAPQ12770 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAPQ12770 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCAPQ12770 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.42■□□□□ 0.38
SCAPQ12770 MIR4515-201ENST00000584082 81 ntBASIC17.42■□□□□ 0.38
SCAPQ12770 AC064836.3-201ENST00000607928 673 ntBASIC17.42■□□□□ 0.38
SCAPQ12770 AP001350.2-201ENST00000625104 1094 ntBASIC17.42■□□□□ 0.38
SCAPQ12770 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.42■□□□□ 0.38
SCAPQ12770 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCAPQ12770 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCAPQ12770 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 HLA-A-202ENST00000376806 1854 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SCAPQ12770 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCAPQ12770 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 AC006538.1-201ENST00000567905 1585 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAPQ12770 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 AC211486.1-202ENST00000416371 468 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 AC004832.2-201ENST00000426397 482 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.41■□□□□ 0.38
SCAPQ12770 CYMP-203ENST00000474680 1263 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 AC211476.1-201ENST00000503899 468 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.41■□□□□ 0.38
SCAPQ12770 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.41■□□□□ 0.38
SCAPQ12770 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.41■□□□□ 0.38
SCAPQ12770 AC092364.2-202ENST00000597012 1073 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 AL645728.2-201ENST00000641974 660 ntBASIC17.41■□□□□ 0.38
SCAPQ12770 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.41■□□□□ 0.38
SCAPQ12770 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.41■□□□□ 0.38
SCAPQ12770 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCAPQ12770 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SCAPQ12770 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
SCAPQ12770 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.4■□□□□ 0.38
SCAPQ12770 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCAPQ12770 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.4■□□□□ 0.38
SCAPQ12770 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAPQ12770 RNA5SP416-201ENST00000516838 111 ntBASIC17.4■□□□□ 0.38
SCAPQ12770 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.4■□□□□ 0.38
SCAPQ12770 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCAPQ12770 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms